There are reasons hot bunking isn't good for long term.
Interesting ideas. One minor nit is that the living quarters you draw assume people don't need intimacy and sex. You're drawing a single-sex submarine. There are no provisions for couples quarters, unless every couple is given a train car to themselves. It would be difficult to split the living quarters into smaller couples spaces, because of access to the radial tubes.Instead, consider enlarging your Jeffries tubes to use the same 12' diameter TBC. Quarters could then be placed anywhere in the main spiral, with access down to the Jeffries tube and from there to the rest of the complex. Or, perhaps more reasonably, swap the positions of the Jeffries tube and main spiral to provide additional shielding to the occupants (they'll be deeper). The Jeffries tube then becomes a main concourse, providing easy access UP to the surface components, and DOWN to the living quarters. If you're assuming sufficient in-situ cement production to line all the tunnels, then there's no reason for surface domes to be constructed on Earth and transported. The bottom half is constructed of concrete (or simply concrete lined pockets) with glass, Lexan, or transparent aluminium either transported from earth in bulk, or created locally. I'm not sure that long term any of those options (other than TA) are appropriate given the need for radiation shielding - perhaps long term building with a clear 1m thick ice layer between sheets of glass would work. For the control domes, using the same technique as earth (horizontally viewing windows with a radiation-shielding (probably dirt) roof) would reduce radiation sufficiently for the purpose.
Mars has massive lava tubes which can be used. Up to 250m inner diameter.
Well it's a fun thought. But what about leaks?
We just need to send some small rovers out to find one the right size, use sealant and install a door I don't think it invokes any large scale construction. Send two 8m doors for an air-locked lava tube. If not, just dig a hole using shovels, built a pit-house with a vertical entrance hole like the natives in NA.
Well it's a fun thought. But what about leaks? Since elongated slender tubes have relatively more surface area for a given volume, you have to effectively seal a large surface for air leaks. I'm thinking that the surface area of long tube varies directly with the volume, whereas the surface area of a sphere is 4πr2 . How would you seal a long tunnel? For example, would most of the volume be unpressurized, or pressurized with cheap Martian atmosphere? How would you deal with cracks from thermal expansion or from stress at the joints, and leaks from the permeability of in situ materials? On earth, water leaks are a big problem for concrete tunnels under the water table. Likewise, natural gas distribution companies have expensive gas leaks.
What motivates having all the spirals at the same depth?